Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Gm2423-201ENSMUST00000074863 733 ntBASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Tmf1B9EKI3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Gm21854-201ENSMUST00000179901 471 ntBASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Gm4804-201ENSMUST00000182234 999 ntBASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC19.16■□□□□ 0.66
Tmf1B9EKI3 AC154846.1-201ENSMUST00000226278 862 ntBASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Tmf1B9EKI3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Gm22189-201ENSMUST00000103822 86 ntBASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Tmf1B9EKI3 AC114543.1-201ENSMUST00000226451 1558 ntBASIC19.15■□□□□ 0.66
Tmf1B9EKI3 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tmf1B9EKI3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tmf1B9EKI3 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Tmf1B9EKI3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tmf1B9EKI3 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Tmf1B9EKI3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Tmf1B9EKI3 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Gm44855-201ENSMUST00000205725 362 ntBASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Tmf1B9EKI3 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Tmf1B9EKI3 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms