Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Gm6159-201ENSMUST00000191249 1724 ntBASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Gm12887B1AVM1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm12895-201ENSMUST00000122214 226 ntBASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm7787-201ENSMUST00000216858 688 ntBASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm18246-201ENSMUST00000221023 728 ntBASIC11.48□□□□□ -0.57
Gm12887B1AVM1 AC102291.3-201ENSMUST00000226566 405 ntBASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm12887B1AVM1 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Gm4535-201ENSMUST00000182274 558 ntBASIC11.47□□□□□ -0.57
Gm12887B1AVM1 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Gm10355-201ENSMUST00000097146 517 ntBASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm12887B1AVM1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms