Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm16026-204ENSMUST00000162652 683 ntBASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav6d-5A0A075B6B9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm4899-201ENSMUST00000178708 719 ntBASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav6d-5A0A075B6B9 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav6d-5A0A075B6B9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav6d-5A0A075B6B9 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms