Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav7n-4A0A075B620 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Gm9252-201ENSMUST00000172364 1602 ntBASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Gm13836-201ENSMUST00000121159 501 ntBASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav7n-4A0A075B620 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gm27646-201ENSMUST00000183989 110 ntBASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gm27867-201ENSMUST00000184778 125 ntBASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Olfr286-202ENSMUST00000205305 969 ntBASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Trav7n-4A0A075B620 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms