Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
U2af1Q9D883 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.7■□□□□ 0.58
U2af1Q9D883 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
U2af1Q9D883 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.69■□□□□ 0.58
U2af1Q9D883 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC18.69■□□□□ 0.58
U2af1Q9D883 Gm16215-201ENSMUST00000161990 637 ntBASIC18.69■□□□□ 0.58
U2af1Q9D883 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.69■□□□□ 0.58
U2af1Q9D883 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Gm2423-201ENSMUST00000074863 733 ntBASIC18.69■□□□□ 0.58
U2af1Q9D883 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
U2af1Q9D883 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
U2af1Q9D883 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC18.69■□□□□ 0.58
U2af1Q9D883 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC18.68■□□□□ 0.58
U2af1Q9D883 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Gm15321-201ENSMUST00000121290 288 ntBASIC18.68■□□□□ 0.58
U2af1Q9D883 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
U2af1Q9D883 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
U2af1Q9D883 Ighv8-14-201ENSMUST00000196781 358 ntBASIC18.68■□□□□ 0.58
U2af1Q9D883 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Gm43697-201ENSMUST00000199637 2581 ntBASIC18.68■□□□□ 0.58
U2af1Q9D883 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
U2af1Q9D883 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.68■□□□□ 0.58
U2af1Q9D883 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC18.67■□□□□ 0.58
U2af1Q9D883 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
U2af1Q9D883 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
U2af1Q9D883 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
U2af1Q9D883 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
U2af1Q9D883 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC18.66■□□□□ 0.58
U2af1Q9D883 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.66■□□□□ 0.58
U2af1Q9D883 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC18.66■□□□□ 0.58
U2af1Q9D883 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
U2af1Q9D883 Gm44608-201ENSMUST00000206827 855 ntBASIC18.66■□□□□ 0.58
U2af1Q9D883 AC124732.1-201ENSMUST00000221551 910 ntBASIC18.66■□□□□ 0.58
U2af1Q9D883 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC18.66■□□□□ 0.58
U2af1Q9D883 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
U2af1Q9D883 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
U2af1Q9D883 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Gm15393-201ENSMUST00000120499 219 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
U2af1Q9D883 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC18.65■□□□□ 0.58
U2af1Q9D883 Gm24694-201ENSMUST00000180054 110 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 Gm9522-201ENSMUST00000182394 926 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 Gm27663-201ENSMUST00000184839 110 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.65■□□□□ 0.58
U2af1Q9D883 Gm44855-201ENSMUST00000205725 362 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 Gm7730-201ENSMUST00000212486 454 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 AC154806.6-201ENSMUST00000228192 202 ntBASIC18.65■□□□□ 0.58
U2af1Q9D883 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms