Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3a3Q9D554 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3a3Q9D554 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Gm27646-201ENSMUST00000183989 110 ntBASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Sf3a3Q9D554 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Sf3a3Q9D554 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sf3a3Q9D554 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sf3a3Q9D554 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms