Protein–RNA interactions for Protein: Q9CZQ6

Raet1e, Retinoic acid early-inducible protein 1-epsilon, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1eQ9CZQ6 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Raet1eQ9CZQ6 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm5682-201ENSMUST00000173402 505 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm10231-201ENSMUST00000181584 441 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm10175-202ENSMUST00000208752 441 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Raet1eQ9CZQ6 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 AA414768-201ENSMUST00000121924 1257 ntBASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Gm23634-201ENSMUST00000175071 91 ntBASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Gm45747-201ENSMUST00000212203 999 ntBASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Raet1eQ9CZQ6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Raet1eQ9CZQ6 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Raet1eQ9CZQ6 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Raet1eQ9CZQ6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Raet1eQ9CZQ6 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms