Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Nkd1Q99MH6 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Nkd1Q99MH6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Nkd1Q99MH6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Gm18733-201ENSMUST00000173950 856 ntBASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Nkd1Q99MH6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms