Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Lims1Q99JW4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Gm6736-201ENSMUST00000166583 948 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Gm2756-201ENSMUST00000195851 400 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Gm5364-201ENSMUST00000216789 889 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.94□□□□□ -0.34
Lims1Q99JW4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Lims1Q99JW4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Gm15427-201ENSMUST00000117288 531 ntBASIC12.93□□□□□ -0.34
Lims1Q99JW4 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.93□□□□□ -0.34
Lims1Q99JW4 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Gm44492-201ENSMUST00000197012 141 ntBASIC12.93□□□□□ -0.34
Lims1Q99JW4 Gm44608-201ENSMUST00000206827 855 ntBASIC12.93□□□□□ -0.34
Lims1Q99JW4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.93□□□□□ -0.34
Lims1Q99JW4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lims1Q99JW4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms