Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm15240-201ENSMUST00000118156 720 ntBASIC16.73■□□□□ 0.27
Col20a1Q923P0 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Mir6392-201ENSMUST00000184924 108 ntBASIC16.73■□□□□ 0.27
Col20a1Q923P0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.73■□□□□ 0.27
Col20a1Q923P0 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.73■□□□□ 0.27
Col20a1Q923P0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Gm9115-201ENSMUST00000120192 1348 ntBASIC16.73■□□□□ 0.27
Col20a1Q923P0 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Col20a1Q923P0 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 AC131690.1-201ENSMUST00000218406 374 ntBASIC16.72■□□□□ 0.27
Col20a1Q923P0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Col20a1Q923P0 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Gm9908-201ENSMUST00000211534 448 ntBASIC16.71■□□□□ 0.27
Col20a1Q923P0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Gm6159-201ENSMUST00000191249 1724 ntBASIC16.71■□□□□ 0.27
Col20a1Q923P0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Col20a1Q923P0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col20a1Q923P0 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col20a1Q923P0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Col20a1Q923P0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC16.71■□□□□ 0.26
Col20a1Q923P0 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Gm18905-201ENSMUST00000205454 928 ntBASIC16.7■□□□□ 0.26
Col20a1Q923P0 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.7■□□□□ 0.26
Col20a1Q923P0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Col20a1Q923P0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms