Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga4Q91XY4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Pcdhga4Q91XY4 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Gm25925-201ENSMUST00000158314 306 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Gm25948-201ENSMUST00000175334 112 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Pcdhga4Q91XY4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Gm15693-201ENSMUST00000120470 637 ntBASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Gm22175-201ENSMUST00000175007 78 ntBASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhga4Q91XY4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhga4Q91XY4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhga4Q91XY4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms