Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Gm5682-201ENSMUST00000173402 505 ntBASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Il17rd-203ENSMUST00000225146 3366 ntBASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpa1Q8VEE4 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Olfr286-202ENSMUST00000205305 969 ntBASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Gm3928-201ENSMUST00000121141 1307 ntBASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpa1Q8VEE4 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpa1Q8VEE4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpa1Q8VEE4 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Gm7787-201ENSMUST00000216858 688 ntBASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Gm18246-201ENSMUST00000221023 728 ntBASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Rpa1Q8VEE4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Mypopos-202ENSMUST00000205975 2321 ntBASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpa1Q8VEE4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms