Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lsm1Q8VC85 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Gm12882-201ENSMUST00000121696 517 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Gm12260-201ENSMUST00000122447 411 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lsm1Q8VC85 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm11025-201ENSMUST00000140773 466 ntBASIC13.62□□□□□ -0.23
Lsm1Q8VC85 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Lsm1Q8VC85 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms