Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Gm25925-201ENSMUST00000158314 306 ntBASIC15.61■□□□□ 0.09
Rpap2Q8VC34 AA543401-201ENSMUST00000164248 1269 ntBASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Gm27533-201ENSMUST00000183800 152 ntBASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Gm37912-201ENSMUST00000191895 3076 ntBASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Rpap2Q8VC34 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Shd-206ENSMUST00000225145 998 ntBASIC15.6■□□□□ 0.09
Rpap2Q8VC34 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Rpap2Q8VC34 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Gm13616-201ENSMUST00000120600 222 ntBASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.59■□□□□ 0.09
Rpap2Q8VC34 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rpap2Q8VC34 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rpap2Q8VC34 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Rpap2Q8VC34 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
Rpap2Q8VC34 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rpap2Q8VC34 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms