Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.22■□□□□ 0.03
Rpp40Q8R1F9 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Syt7-204ENSMUST00000223586 1344 ntBASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.21■□□□□ 0.03
Rpp40Q8R1F9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpp40Q8R1F9 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpp40Q8R1F9 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rpp40Q8R1F9 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rpp40Q8R1F9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Gm15393-201ENSMUST00000120499 219 ntBASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Gm15321-201ENSMUST00000121290 288 ntBASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Mir6977-201ENSMUST00000184960 64 ntBASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rpp40Q8R1F9 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Gm27437-201ENSMUST00000183429 107 ntBASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Gm37714-201ENSMUST00000194742 342 ntBASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rpp40Q8R1F9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms