Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm25255-201ENSMUST00000179579 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24755-201ENSMUST00000179691 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm26506-201ENSMUST00000179692 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm25086-201ENSMUST00000179931 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm23243-201ENSMUST00000180047 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24659-201ENSMUST00000180212 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm24169-201ENSMUST00000180244 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm23689-201ENSMUST00000180354 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm27359-201ENSMUST00000184153 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm27785-201ENSMUST00000184268 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm27466-201ENSMUST00000184396 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm27703-201ENSMUST00000184836 110 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm29310-201ENSMUST00000185468 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21825-201ENSMUST00000185728 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm29109-201ENSMUST00000185895 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21896-201ENSMUST00000186520 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21873-201ENSMUST00000186728 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21794-201ENSMUST00000187056 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21880-201ENSMUST00000187275 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21826-201ENSMUST00000187451 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21198-201ENSMUST00000188393 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21749-201ENSMUST00000189343 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21901-201ENSMUST00000189568 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm29424-201ENSMUST00000189716 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm28599-201ENSMUST00000189838 694 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21867-201ENSMUST00000189917 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm29269-201ENSMUST00000190087 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21722-201ENSMUST00000190153 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm28423-201ENSMUST00000190701 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21899-201ENSMUST00000190745 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21910-201ENSMUST00000191163 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21849-201ENSMUST00000191571 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm28678-201ENSMUST00000191593 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm20910-201ENSMUST00000193268 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm21871-201ENSMUST00000194621 696 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gm7774-201ENSMUST00000200064 533 ntBASIC13.44□□□□□ -0.26
Clrn1Q8K445 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clrn1Q8K445 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.43□□□□□ -0.26
Clrn1Q8K445 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Gm10253-201ENSMUST00000194270 940 ntBASIC13.43□□□□□ -0.26
Clrn1Q8K445 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.43□□□□□ -0.26
Clrn1Q8K445 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.43□□□□□ -0.26
Clrn1Q8K445 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Clrn1Q8K445 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.43□□□□□ -0.26
Clrn1Q8K445 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.43□□□□□ -0.26
Clrn1Q8K445 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clrn1Q8K445 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clrn1Q8K445 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms