Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Gm8749-201ENSMUST00000117737 331 ntBASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Spr-ps1-201ENSMUST00000089584 605 ntBASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lrrtm1Q8K377 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gm13464-201ENSMUST00000119418 935 ntBASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gm15173-201ENSMUST00000122049 433 ntBASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gm43347-201ENSMUST00000200226 580 ntBASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lrrtm1Q8K377 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Lrrtm1Q8K377 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Lrrtm1Q8K377 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC12.2□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms