Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.82■□□□□ 0.28
Cchcr1Q8K2I2 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Gm11779-201ENSMUST00000118541 368 ntBASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cchcr1Q8K2I2 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Gm14494-201ENSMUST00000118786 435 ntBASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Gm38225-201ENSMUST00000194001 393 ntBASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Gm10175-201ENSMUST00000086013 645 ntBASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cchcr1Q8K2I2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Gm42466-201ENSMUST00000202099 1301 ntBASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 AC126549.2-201ENSMUST00000223997 1976 ntBASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
Cchcr1Q8K2I2 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms