Protein–RNA interactions for Protein: Q8K2F3

Depp1, Protein DEPP1, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depp1Q8K2F3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Depp1Q8K2F3 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.16□□□□□ -0.46
Depp1Q8K2F3 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.16□□□□□ -0.46
Depp1Q8K2F3 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Gm6973-201ENSMUST00000117080 721 ntBASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Gm15427-201ENSMUST00000117288 531 ntBASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.16□□□□□ -0.46
Depp1Q8K2F3 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Gm27741-201ENSMUST00000185060 237 ntBASIC12.16□□□□□ -0.46
Depp1Q8K2F3 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Depp1Q8K2F3 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Gm20553-201ENSMUST00000204205 844 ntBASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Depp1Q8K2F3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms