Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syne4Q8CII8 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syne4Q8CII8 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Syne4Q8CII8 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Syne4Q8CII8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Gm13050-201ENSMUST00000122149 1345 ntBASIC16■□□□□ 0.15
Syne4Q8CII8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC16■□□□□ 0.15
Syne4Q8CII8 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC16■□□□□ 0.15
Syne4Q8CII8 Dctn4-202ENSMUST00000223590 1530 ntBASIC16■□□□□ 0.15
Syne4Q8CII8 Gm15371-201ENSMUST00000117057 784 ntBASIC16■□□□□ 0.15
Syne4Q8CII8 Gm12485-201ENSMUST00000119641 291 ntBASIC16■□□□□ 0.15
Syne4Q8CII8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC16■□□□□ 0.15
Syne4Q8CII8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16■□□□□ 0.15
Syne4Q8CII8 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16■□□□□ 0.15
Syne4Q8CII8 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
Syne4Q8CII8 Gm5370-201ENSMUST00000187187 574 ntBASIC16■□□□□ 0.15
Syne4Q8CII8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC16■□□□□ 0.15
Syne4Q8CII8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC16■□□□□ 0.15
Syne4Q8CII8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Gm42632-201ENSMUST00000201707 2411 ntBASIC16■□□□□ 0.15
Syne4Q8CII8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16■□□□□ 0.15
Syne4Q8CII8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Syne4Q8CII8 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.99■□□□□ 0.15
Syne4Q8CII8 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gm24644-201ENSMUST00000157114 139 ntBASIC15.99■□□□□ 0.15
Syne4Q8CII8 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gm24196-201ENSMUST00000179161 110 ntBASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gm27772-201ENSMUST00000184900 187 ntBASIC15.99■□□□□ 0.15
Syne4Q8CII8 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC15.99■□□□□ 0.15
Syne4Q8CII8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gm43818-201ENSMUST00000200605 466 ntBASIC15.99■□□□□ 0.15
Syne4Q8CII8 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Syne4Q8CII8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm23931-201ENSMUST00000103842 109 ntBASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm5940-201ENSMUST00000117582 1068 ntBASIC15.98■□□□□ 0.15
Syne4Q8CII8 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Ighv1-51-201ENSMUST00000192903 354 ntBASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.98■□□□□ 0.15
Syne4Q8CII8 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm7399-201ENSMUST00000032395 858 ntBASIC15.98■□□□□ 0.15
Syne4Q8CII8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Syne4Q8CII8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms