Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC15.52■□□□□ 0.08
Sox30Q8CGW4 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Sox30Q8CGW4 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Sox30Q8CGW4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gm18737-201ENSMUST00000173594 937 ntBASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gm44492-201ENSMUST00000197012 141 ntBASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 CT030704.2-201ENSMUST00000228887 494 ntBASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Sox30Q8CGW4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Gm37644-201ENSMUST00000192190 2270 ntBASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.5■□□□□ 0.07
Sox30Q8CGW4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.5■□□□□ 0.07
Sox30Q8CGW4 AC138767.1-201ENSMUST00000222661 415 ntBASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.5■□□□□ 0.07
Sox30Q8CGW4 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Gm44065-201ENSMUST00000203184 3527 ntBASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Gm2810-201ENSMUST00000118681 990 ntBASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Sox30Q8CGW4 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms