Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm11249-201ENSMUST00000117071 859 ntBASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm18636-201ENSMUST00000218846 1066 ntBASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Hist3h2bbQ8CGP0 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Gm43183-201ENSMUST00000200632 547 ntBASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Hist3h2bbQ8CGP0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Hist3h2bbQ8CGP0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Hist3h2bbQ8CGP0 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms