Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Gm17807-201ENSMUST00000186869 298 ntBASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc28bQ8CEG5 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc28bQ8CEG5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Gm14859-201ENSMUST00000117752 357 ntBASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc28bQ8CEG5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc28bQ8CEG5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms