Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc38Q8CDN8 Gm43056-201ENSMUST00000197865 2791 ntBASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 H2af-ps-201ENSMUST00000119066 295 ntBASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Gm12882-201ENSMUST00000121696 517 ntBASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Gm44771-201ENSMUST00000206975 626 ntBASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc38Q8CDN8 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc38Q8CDN8 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Gm5264-201ENSMUST00000190584 848 ntBASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc38Q8CDN8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ccdc38Q8CDN8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms