Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Gm25857-201ENSMUST00000082788 129 ntBASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Shisa4Q8CA71 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Gm12585-201ENSMUST00000117307 290 ntBASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Gm15240-201ENSMUST00000118156 720 ntBASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Gm15393-201ENSMUST00000120499 219 ntBASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Gm16215-201ENSMUST00000161990 637 ntBASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.44■□□□□ 0.22
Shisa4Q8CA71 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 AC125350.2-201ENSMUST00000224737 727 ntBASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Syt7-205ENSMUST00000224135 1557 ntBASIC16.43■□□□□ 0.22
Shisa4Q8CA71 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Gm6218-201ENSMUST00000219812 628 ntBASIC16.42■□□□□ 0.22
Shisa4Q8CA71 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Shisa4Q8CA71 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.42■□□□□ 0.22
Shisa4Q8CA71 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms