Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Gm26513-201ENSMUST00000181802 2489 ntBASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Alx1Q8C8B0 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Gm12020-201ENSMUST00000119030 2042 ntBASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Gm27437-201ENSMUST00000183429 107 ntBASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.55■□□□□ 0.24
Alx1Q8C8B0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.55■□□□□ 0.24
Alx1Q8C8B0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.55■□□□□ 0.24
Alx1Q8C8B0 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Alx1Q8C8B0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Gm15240-201ENSMUST00000118156 720 ntBASIC16.54■□□□□ 0.24
Alx1Q8C8B0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Gm5425-201ENSMUST00000214125 459 ntBASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Alx1Q8C8B0 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Gm6912-201ENSMUST00000117218 544 ntBASIC16.53■□□□□ 0.24
Alx1Q8C8B0 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Mir497b-201ENSMUST00000093601 125 ntBASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Alx1Q8C8B0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Alx1Q8C8B0 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms