Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Mir449b-201ENSMUST00000104833 80 ntBASIC15.69■□□□□ 0.1
Trim9Q8C7M3 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Gm15693-201ENSMUST00000120470 637 ntBASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Mir125a-201ENSMUST00000083545 68 ntBASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.69■□□□□ 0.1
Trim9Q8C7M3 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Gm7774-201ENSMUST00000200064 533 ntBASIC15.68■□□□□ 0.1
Trim9Q8C7M3 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trim9Q8C7M3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gm12428-201ENSMUST00000119844 727 ntBASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gm26308-201ENSMUST00000157768 69 ntBASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gm28630-201ENSMUST00000187806 498 ntBASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Dupd1-202ENSMUST00000224735 548 ntBASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trim9Q8C7M3 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms