Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm18558-201ENSMUST00000186253 1214 ntBASIC15.76■□□□□ 0.11
Trim47Q8C0E3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim47Q8C0E3 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Gm12134-201ENSMUST00000122109 520 ntBASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Gm9109-201ENSMUST00000120254 1405 ntBASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trim47Q8C0E3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 AC115735.4-201ENSMUST00000227460 1944 ntBASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Gm45691-201ENSMUST00000206905 1120 ntBASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trim47Q8C0E3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Gm9522-201ENSMUST00000182394 926 ntBASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Gm7730-201ENSMUST00000212486 454 ntBASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trim47Q8C0E3 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms