Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Gm4804-201ENSMUST00000182234 999 ntBASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Gm44608-201ENSMUST00000206827 855 ntBASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Gm18624-201ENSMUST00000220966 658 ntBASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Sh3rf2Q8BZT2 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm6912-201ENSMUST00000117218 544 ntBASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm9908-201ENSMUST00000211534 448 ntBASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 AC154687.2-201ENSMUST00000223853 640 ntBASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Sh3rf2Q8BZT2 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gm12138-201ENSMUST00000122180 951 ntBASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Mir6392-201ENSMUST00000184924 108 ntBASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gm19220-201ENSMUST00000222682 803 ntBASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Sh3rf2Q8BZT2 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms