Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Gm10275-201ENSMUST00000092620 635 ntBASIC12.56□□□□□ -0.4
SprnQ8BWU1 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.56□□□□□ -0.4
SprnQ8BWU1 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
SprnQ8BWU1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.56□□□□□ -0.4
SprnQ8BWU1 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SprnQ8BWU1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.55□□□□□ -0.4
SprnQ8BWU1 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.55□□□□□ -0.4
SprnQ8BWU1 Gm9182-201ENSMUST00000217829 639 ntBASIC12.55□□□□□ -0.4
SprnQ8BWU1 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.55□□□□□ -0.4
SprnQ8BWU1 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.55□□□□□ -0.4
SprnQ8BWU1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SprnQ8BWU1 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Gm27702-201ENSMUST00000184512 56 ntBASIC12.54□□□□□ -0.4
SprnQ8BWU1 Gm7787-201ENSMUST00000216858 688 ntBASIC12.54□□□□□ -0.4
SprnQ8BWU1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SprnQ8BWU1 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.53□□□□□ -0.4
SprnQ8BWU1 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms