Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdk5rap1Q8BTW8 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm9522-201ENSMUST00000182394 926 ntBASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Cdk5rap1Q8BTW8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Cdk5rap1Q8BTW8 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Cdk5rap1Q8BTW8 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms