Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Gm4875-201ENSMUST00000118257 786 ntBASIC14.55□□□□□ -0.08
Nup54Q8BTS4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Nup54Q8BTS4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 AC238811.1-201ENSMUST00000225302 441 ntBASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Nup54Q8BTS4 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Gm27838-201ENSMUST00000184829 128 ntBASIC14.53□□□□□ -0.08
Nup54Q8BTS4 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms