Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Gm10275-202ENSMUST00000168697 495 ntBASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Gm28760-201ENSMUST00000185995 736 ntBASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Gm37917-201ENSMUST00000194711 392 ntBASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Gm18187-201ENSMUST00000196476 984 ntBASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Gm45668-201ENSMUST00000211271 493 ntBASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Gm10275-201ENSMUST00000092620 635 ntBASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Usp1Q8BJQ2 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Gm11478-201ENSMUST00000117851 599 ntBASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Gm33320-201ENSMUST00000192232 530 ntBASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Gm6916-202ENSMUST00000205523 195 ntBASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Usp1Q8BJQ2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Gm14127-201ENSMUST00000117906 678 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Gm15393-201ENSMUST00000120499 219 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Gm12091-201ENSMUST00000146791 830 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Gm43433-201ENSMUST00000196573 481 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Usp1Q8BJQ2 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Usp1Q8BJQ2 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.1■□□□□ 0.01
Usp1Q8BJQ2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Usp1Q8BJQ2 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC15.1■□□□□ 0.01
Usp1Q8BJQ2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms