Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Chmp2bQ8BJF9 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 AC154222.1-201ENSMUST00000223882 475 ntBASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Chmp2bQ8BJF9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Chmp2bQ8BJF9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Gm12500-202ENSMUST00000186471 2428 ntBASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Gm5479-201ENSMUST00000160578 435 ntBASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms