Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Gm14494-201ENSMUST00000118786 435 ntBASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Gm45098-201ENSMUST00000207179 657 ntBASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 AW822252-206ENSMUST00000208904 237 ntBASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Gm43677-201ENSMUST00000198098 2378 ntBASIC14.87□□□□□ -0.03
Ccdc40Q8BI79 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Gm14042-201ENSMUST00000120139 833 ntBASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Bloc1s5-203ENSMUST00000224902 612 ntBASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.86□□□□□ -0.03
Ccdc40Q8BI79 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Gm8000-201ENSMUST00000188378 592 ntBASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Gm10175-201ENSMUST00000086013 645 ntBASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Acot6-202ENSMUST00000222921 3622 ntBASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ccdc40Q8BI79 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC14.84□□□□□ -0.03
Ccdc40Q8BI79 Gm5479-201ENSMUST00000160578 435 ntBASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms