Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.03□□□□□ -0.48
Upk3bQ80YF6 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Gm10060-201ENSMUST00000212002 111 ntBASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Upk3bQ80YF6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Upk3bQ80YF6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Gm27300-201ENSMUST00000184085 97 ntBASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Gm27335-201ENSMUST00000184758 97 ntBASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Upk3bQ80YF6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Gm24589-201ENSMUST00000116692 94 ntBASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Upk3bQ80YF6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms