Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Vrk1Q80X41 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Vrk1Q80X41 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.58□□□□□ -0.23
Vrk1Q80X41 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vrk1Q80X41 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Vrk1Q80X41 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Vrk1Q80X41 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.58□□□□□ -0.24
Vrk1Q80X41 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.58□□□□□ -0.24
Vrk1Q80X41 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.58□□□□□ -0.24
Vrk1Q80X41 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Vrk1Q80X41 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.57□□□□□ -0.24
Vrk1Q80X41 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm15460-201ENSMUST00000118147 391 ntBASIC13.57□□□□□ -0.24
Vrk1Q80X41 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm18624-201ENSMUST00000220966 658 ntBASIC13.57□□□□□ -0.24
Vrk1Q80X41 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.57□□□□□ -0.24
Vrk1Q80X41 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.57□□□□□ -0.24
Vrk1Q80X41 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.57□□□□□ -0.24
Vrk1Q80X41 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.56□□□□□ -0.24
Vrk1Q80X41 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.56□□□□□ -0.24
Vrk1Q80X41 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Vrk1Q80X41 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms