Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp8Q80U87 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Olfr286-202ENSMUST00000205305 969 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm45747-201ENSMUST00000212203 999 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Usp8Q80U87 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.29□□□□□ -0.12
Usp8Q80U87 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Usp8Q80U87 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Gm1401-201ENSMUST00000122048 772 ntBASIC14.28□□□□□ -0.12
Usp8Q80U87 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.28□□□□□ -0.12
Usp8Q80U87 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.28□□□□□ -0.12
Usp8Q80U87 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.28□□□□□ -0.12
Usp8Q80U87 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.28□□□□□ -0.12
Usp8Q80U87 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.28□□□□□ -0.12
Usp8Q80U87 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Usp8Q80U87 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp8Q80U87 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.27□□□□□ -0.12
Usp8Q80U87 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.27□□□□□ -0.12
Usp8Q80U87 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Usp8Q80U87 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.27□□□□□ -0.13
Usp8Q80U87 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Gm9727-201ENSMUST00000161387 555 ntBASIC14.27□□□□□ -0.13
Usp8Q80U87 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.27□□□□□ -0.13
Usp8Q80U87 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.27□□□□□ -0.13
Usp8Q80U87 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Usp8Q80U87 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms