Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdh19Q80TF3 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh19Q80TF3 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.18
Pcdh19Q80TF3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh19Q80TF3 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh19Q80TF3 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh19Q80TF3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdh19Q80TF3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Gm12585-201ENSMUST00000117307 290 ntBASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Gm15321-201ENSMUST00000121290 288 ntBASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Gm29667-201ENSMUST00000190817 490 ntBASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdh19Q80TF3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Gm15460-201ENSMUST00000118147 391 ntBASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
Pcdh19Q80TF3 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Gm9768-201ENSMUST00000206007 2861 ntBASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Carlr-201ENSMUST00000181515 2574 ntBASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Pcdh19Q80TF3 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms