Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Gm17837-201ENSMUST00000186435 985 ntBASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rnf139Q7TMV1 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf139Q7TMV1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf139Q7TMV1 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rnf139Q7TMV1 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Gm15653-201ENSMUST00000119247 907 ntBASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Gm6916-202ENSMUST00000205523 195 ntBASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rnf139Q7TMV1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Gm44344-201ENSMUST00000200287 129 ntBASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Gm46209-201ENSMUST00000217912 553 ntBASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rnf139Q7TMV1 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rnf139Q7TMV1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC15.18■□□□□ 0.02
Rnf139Q7TMV1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms