Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rif1Q6PR54 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.96□□□□□ -0.49
Rif1Q6PR54 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Gm44397-201ENSMUST00000195950 113 ntBASIC11.96□□□□□ -0.5
Rif1Q6PR54 Gm18473-201ENSMUST00000220543 868 ntBASIC11.96□□□□□ -0.5
Rif1Q6PR54 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.96□□□□□ -0.5
Rif1Q6PR54 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rif1Q6PR54 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.95□□□□□ -0.5
Rif1Q6PR54 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm20392-201ENSMUST00000173047 701 ntBASIC11.95□□□□□ -0.5
Rif1Q6PR54 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.95□□□□□ -0.5
Rif1Q6PR54 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.95□□□□□ -0.5
Rif1Q6PR54 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.95□□□□□ -0.5
Rif1Q6PR54 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm14028-201ENSMUST00000117434 479 ntBASIC11.95□□□□□ -0.5
Rif1Q6PR54 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gm5425-201ENSMUST00000214125 459 ntBASIC11.95□□□□□ -0.5
Rif1Q6PR54 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rif1Q6PR54 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm7292-201ENSMUST00000194706 2527 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm2991-201ENSMUST00000173338 480 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm29155-201ENSMUST00000185910 269 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 Gm45219-201ENSMUST00000205602 465 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.94□□□□□ -0.5
Rif1Q6PR54 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rif1Q6PR54 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms