Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rad54bQ6PFE3 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rad54bQ6PFE3 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Matn2-206ENSMUST00000228570 2798 ntBASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rad54bQ6PFE3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.27□□□□□ -0.12
Rad54bQ6PFE3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms