Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Ptprs-211ENSMUST00000223859 5588 ntBASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pdzrn3Q69ZS0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 AA619741-201ENSMUST00000195095 646 ntBASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Olfr286-202ENSMUST00000205305 969 ntBASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Gm18624-201ENSMUST00000220966 658 ntBASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 AC154687.2-201ENSMUST00000223853 640 ntBASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Mir125a-201ENSMUST00000083545 68 ntBASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdzrn3Q69ZS0 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Gm37230-201ENSMUST00000194491 818 ntBASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.4■□□□□ 0.38
Pdzrn3Q69ZS0 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Gm9726-201ENSMUST00000180321 678 ntBASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Gm8602-201ENSMUST00000184045 607 ntBASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdzrn3Q69ZS0 Gm45751-201ENSMUST00000210185 1573 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms