Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Gm9719-201ENSMUST00000162765 543 ntBASIC13.69□□□□□ -0.22
Sdc3Q64519 Gm9182-201ENSMUST00000217829 639 ntBASIC13.69□□□□□ -0.22
Sdc3Q64519 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.69□□□□□ -0.22
Sdc3Q64519 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.69□□□□□ -0.22
Sdc3Q64519 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Sdc3Q64519 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Sdc3Q64519 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm13453-201ENSMUST00000118708 357 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm27989-201ENSMUST00000184721 107 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm27321-201ENSMUST00000185021 205 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm29310-201ENSMUST00000185468 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21825-201ENSMUST00000185728 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm29109-201ENSMUST00000185895 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21896-201ENSMUST00000186520 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21873-201ENSMUST00000186728 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21794-201ENSMUST00000187056 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21880-201ENSMUST00000187275 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21826-201ENSMUST00000187451 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21198-201ENSMUST00000188393 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21749-201ENSMUST00000189343 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21901-201ENSMUST00000189568 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm29424-201ENSMUST00000189716 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm28599-201ENSMUST00000189838 694 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21867-201ENSMUST00000189917 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm29269-201ENSMUST00000190087 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21722-201ENSMUST00000190153 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm28423-201ENSMUST00000190701 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21899-201ENSMUST00000190745 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21910-201ENSMUST00000191163 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21849-201ENSMUST00000191571 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm28678-201ENSMUST00000191593 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm20910-201ENSMUST00000193268 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm21871-201ENSMUST00000194621 696 ntBASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Sdc3Q64519 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.68□□□□□ -0.22
Sdc3Q64519 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Sdc3Q64519 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms