Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scn9aQ62205 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn9aQ62205 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn9aQ62205 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.43■□□□□ 0.22
Scn9aQ62205 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC16.43■□□□□ 0.22
Scn9aQ62205 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn9aQ62205 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn9aQ62205 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn9aQ62205 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC16.42■□□□□ 0.22
Scn9aQ62205 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.42■□□□□ 0.22
Scn9aQ62205 Gm9368-201ENSMUST00000219348 831 ntBASIC16.42■□□□□ 0.22
Scn9aQ62205 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scn9aQ62205 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn9aQ62205 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn9aQ62205 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC16.42■□□□□ 0.22
Scn9aQ62205 Gm18753-201ENSMUST00000201000 566 ntBASIC16.42■□□□□ 0.22
Scn9aQ62205 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.42■□□□□ 0.22
Scn9aQ62205 Gm5161-201ENSMUST00000075243 853 ntBASIC16.42■□□□□ 0.22
Scn9aQ62205 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scn9aQ62205 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn9aQ62205 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scn9aQ62205 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scn9aQ62205 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.41■□□□□ 0.22
Scn9aQ62205 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn9aQ62205 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Scn9aQ62205 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.41■□□□□ 0.22
Scn9aQ62205 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn9aQ62205 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Gm9347-201ENSMUST00000211473 1607 ntBASIC16.41■□□□□ 0.22
Scn9aQ62205 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn9aQ62205 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm7118-201ENSMUST00000200167 1003 ntBASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn9aQ62205 CT573034.1-201ENSMUST00000222983 313 ntBASIC16.4■□□□□ 0.22
Scn9aQ62205 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm37411-201ENSMUST00000194180 2282 ntBASIC16.4■□□□□ 0.22
Scn9aQ62205 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm44207-201ENSMUST00000204568 1424 ntBASIC16.4■□□□□ 0.22
Scn9aQ62205 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC16.4■□□□□ 0.22
Scn9aQ62205 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm42550-201ENSMUST00000201553 960 ntBASIC16.4■□□□□ 0.22
Scn9aQ62205 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
Scn9aQ62205 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn9aQ62205 Gm43509-201ENSMUST00000196551 2594 ntBASIC16.39■□□□□ 0.22
Scn9aQ62205 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Scn9aQ62205 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC16.39■□□□□ 0.21
Scn9aQ62205 Gm2991-201ENSMUST00000173338 480 ntBASIC16.39■□□□□ 0.21
Scn9aQ62205 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC16.39■□□□□ 0.21
Scn9aQ62205 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC16.39■□□□□ 0.21
Scn9aQ62205 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Scn9aQ62205 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms