Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Gm7730-201ENSMUST00000212486 454 ntBASIC14.8□□□□□ -0.04
Smarcd1Q61466 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm20445-201ENSMUST00000061905 565 ntBASIC14.8□□□□□ -0.04
Smarcd1Q61466 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.8□□□□□ -0.04
Smarcd1Q61466 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.8□□□□□ -0.04
Smarcd1Q61466 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smarcd1Q61466 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.79□□□□□ -0.04
Smarcd1Q61466 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Gm5866-201ENSMUST00000177881 973 ntBASIC14.79□□□□□ -0.04
Smarcd1Q61466 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Gm18027-201ENSMUST00000218947 619 ntBASIC14.79□□□□□ -0.04
Smarcd1Q61466 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.79□□□□□ -0.04
Smarcd1Q61466 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smarcd1Q61466 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcd1Q61466 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Gm21470-201ENSMUST00000187680 696 ntBASIC14.78□□□□□ -0.04
Smarcd1Q61466 Gm37714-201ENSMUST00000194742 342 ntBASIC14.78□□□□□ -0.04
Smarcd1Q61466 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.78□□□□□ -0.04
Smarcd1Q61466 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smarcd1Q61466 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd1Q61466 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd1Q61466 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.77□□□□□ -0.04
Smarcd1Q61466 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd1Q61466 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd1Q61466 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.77□□□□□ -0.04
Smarcd1Q61466 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd1Q61466 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.77□□□□□ -0.04
Smarcd1Q61466 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Smarcd1Q61466 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd1Q61466 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd1Q61466 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd1Q61466 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.77□□□□□ -0.05
Smarcd1Q61466 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd1Q61466 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smarcd1Q61466 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms