Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Six4Q61321 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Six4Q61321 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Six4Q61321 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Gm13453-201ENSMUST00000118708 357 ntBASIC14.34□□□□□ -0.11
Six4Q61321 Gm15920-201ENSMUST00000118998 402 ntBASIC14.34□□□□□ -0.11
Six4Q61321 Gm43703-201ENSMUST00000200523 763 ntBASIC14.34□□□□□ -0.11
Six4Q61321 Gm44608-201ENSMUST00000206827 855 ntBASIC14.34□□□□□ -0.11
Six4Q61321 Gm44872-201ENSMUST00000207864 420 ntBASIC14.34□□□□□ -0.11
Six4Q61321 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.34□□□□□ -0.11
Six4Q61321 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.34□□□□□ -0.11
Six4Q61321 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Six4Q61321 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.34□□□□□ -0.11
Six4Q61321 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Six4Q61321 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six4Q61321 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six4Q61321 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Six4Q61321 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Six4Q61321 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Six4Q61321 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Six4Q61321 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Six4Q61321 Gm15653-201ENSMUST00000119247 907 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Gm14767-201ENSMUST00000121559 586 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.33□□□□□ -0.12
Six4Q61321 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Gm7775-201ENSMUST00000218871 853 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Gm9063-201ENSMUST00000223299 582 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Six4Q61321 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Six4Q61321 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.33□□□□□ -0.12
Six4Q61321 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Six4Q61321 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Six4Q61321 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Six4Q61321 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Six4Q61321 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
Six4Q61321 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.32□□□□□ -0.12
Six4Q61321 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Six4Q61321 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.32□□□□□ -0.12
Six4Q61321 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Six4Q61321 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Six4Q61321 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Six4Q61321 Gm27321-201ENSMUST00000185021 205 ntBASIC14.32□□□□□ -0.12
Six4Q61321 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.32□□□□□ -0.12
Six4Q61321 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.32□□□□□ -0.12
Six4Q61321 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Six4Q61321 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.32□□□□□ -0.12
Six4Q61321 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.32□□□□□ -0.12
Six4Q61321 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Six4Q61321 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms