Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Gm8801-201ENSMUST00000173255 1064 ntBASIC11.82□□□□□ -0.52
Hcfc1Q61191 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.82□□□□□ -0.52
Hcfc1Q61191 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.82□□□□□ -0.52
Hcfc1Q61191 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Hcfc1Q61191 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Gm14451-201ENSMUST00000121581 1542 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Gm18827-201ENSMUST00000188341 790 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Gm8213-201ENSMUST00000118191 441 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.81□□□□□ -0.52
Hcfc1Q61191 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Hcfc1Q61191 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Gm12384-201ENSMUST00000119228 919 ntBASIC11.8□□□□□ -0.52
Hcfc1Q61191 Gm13350-201ENSMUST00000120519 479 ntBASIC11.8□□□□□ -0.52
Hcfc1Q61191 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.8□□□□□ -0.52
Hcfc1Q61191 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Hcfc1Q61191 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Hcfc1Q61191 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Hcfc1Q61191 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Hcfc1Q61191 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Hcfc1Q61191 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms