Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Selenot-ps-201ENSMUST00000119098 593 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm9083-201ENSMUST00000120423 819 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm37922-201ENSMUST00000195596 455 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.75□□□□□ -0.21
Col12a1Q60847 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Col12a1Q60847 Gm43579-201ENSMUST00000202387 1307 ntBASIC13.75□□□□□ -0.21
Col12a1Q60847 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Col12a1Q60847 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.74□□□□□ -0.21
Col12a1Q60847 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.74□□□□□ -0.21
Col12a1Q60847 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.74□□□□□ -0.21
Col12a1Q60847 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.74□□□□□ -0.21
Col12a1Q60847 Gm44126-201ENSMUST00000204831 514 ntBASIC13.74□□□□□ -0.21
Col12a1Q60847 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.74□□□□□ -0.21
Col12a1Q60847 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Col12a1Q60847 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.74□□□□□ -0.21
Col12a1Q60847 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Col12a1Q60847 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.74□□□□□ -0.21
Col12a1Q60847 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm11591-201ENSMUST00000120063 702 ntBASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm14277-201ENSMUST00000121195 360 ntBASIC13.73□□□□□ -0.21
Col12a1Q60847 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
Col12a1Q60847 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm18584-201ENSMUST00000203098 964 ntBASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm10268-201ENSMUST00000085340 555 ntBASIC13.73□□□□□ -0.21
Col12a1Q60847 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm3508-201ENSMUST00000186012 792 ntBASIC13.73□□□□□ -0.21
Col12a1Q60847 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.73□□□□□ -0.21
Col12a1Q60847 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Col12a1Q60847 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.72□□□□□ -0.21
Col12a1Q60847 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Col12a1Q60847 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms