Protein–RNA interactions for Protein: Q60778

Nfkbib, NF-kappa-B inhibitor beta, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbibQ60778 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Gm28760-201ENSMUST00000185995 736 ntBASIC17.04■□□□□ 0.32
NfkbibQ60778 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.04■□□□□ 0.32
NfkbibQ60778 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.04■□□□□ 0.32
NfkbibQ60778 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
NfkbibQ60778 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.04■□□□□ 0.32
NfkbibQ60778 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
NfkbibQ60778 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NfkbibQ60778 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NfkbibQ60778 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.04■□□□□ 0.32
NfkbibQ60778 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Gm6912-201ENSMUST00000117218 544 ntBASIC17.03■□□□□ 0.32
NfkbibQ60778 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Gm8584-201ENSMUST00000171982 758 ntBASIC17.03■□□□□ 0.32
NfkbibQ60778 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Ighv1-51-201ENSMUST00000192903 354 ntBASIC17.03■□□□□ 0.32
NfkbibQ60778 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
NfkbibQ60778 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Gm42690-201ENSMUST00000197921 1836 ntBASIC17.03■□□□□ 0.32
NfkbibQ60778 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
NfkbibQ60778 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NfkbibQ60778 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC17.02■□□□□ 0.32
NfkbibQ60778 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
NfkbibQ60778 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
NfkbibQ60778 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.02■□□□□ 0.32
NfkbibQ60778 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC17.02■□□□□ 0.32
NfkbibQ60778 AL593843.1-201ENSMUST00000195891 145 ntBASIC17.02■□□□□ 0.32
NfkbibQ60778 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
NfkbibQ60778 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
NfkbibQ60778 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NfkbibQ60778 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NfkbibQ60778 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NfkbibQ60778 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NfkbibQ60778 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NfkbibQ60778 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
NfkbibQ60778 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
NfkbibQ60778 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
NfkbibQ60778 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Gm42471-201ENSMUST00000201457 1865 ntBASIC17.01■□□□□ 0.31
NfkbibQ60778 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
NfkbibQ60778 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
NfkbibQ60778 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms